Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802316.1_cds_XP_016478824.1_7001
CDS Infomation

[gene=LOC107800181] [db_xref=GeneID:107800181] [protein=protein-tyrosine-phosphatase MKP1-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478824.1] [location=31036..>31953] [gbkey=CDS]
Sequence

ATGTTGGGGTTAGATGAGAAGGACAGGGTACCTGGTGGGAATCGGAAAACTTATGCACGG
TCTGTTTCCTGGTCTGATAGGTCCCCTACTAAGTCCAGTGCCAAACCACAATGGAATAGT
AAAGCAAGGGCTTGTTTGCCACCCCTTCAGCCTCTTTCTATTACCAGACCAAGTGCTGAG
GAGTGGCCTTGTGCTGGGTCGGATGATCTTGGCGTATGGCCTAATAATCCCCCTACTCCA
GGTGGTAGGCTTGGACCAGTCAGCACCCGTGAAGGTTCAGCTACTAAGCAGGCTCCGCGA
GAATTTGAATTCAAGAAAGACAAGCTTGCTTTCTTCAATAAGGAATGCTCTAAGATTGTG
GATCACATTTATTTAGGAAGTGACACCGTGGCAAAGAATCGTGATATTCTCCATGAGAAT
GGAATCACTCATGTCTTAAACTGTGTAGGGTTTAGTTGTCCCGAATACTTTAAGGATGAT
CTCGTGTACAAGACACTCTGGCTGCAGGATAGTCCAACTGAGGATATAACAAGTATTCTC
TATGATGTCTTTGATTATTTTGAAGATGTTCGTGAACAAGGTGGGAGAGTTTTTGTGCAC
TGCTACCAGGGAGTGTCCCGATCAACCTCTTTGGTTATTGCATATCTTATGTGGAAAGAG
GGGTTGAGCTTTGAAGATGCATTCCAGCATGTAAAAGCTGCAAGAGGAGTGACAAACCCG
AATATGGGTTTTGCTTGCCAACTATTGCAGTGCCAGAAACGAGTGCATGCTCTACNCCTA
CCTGTGAGTCCGAGTTCTGTGCTTAGAATGTACAGGATGGCACCTCACTCCCCATATGAT
CCCCTTCATTTGGTGCCAAAAATGCTGAATGAGGCAGGGGCTGAAGGATTTGATTCTCGC
GGAGCCTTCCTTGTTCTT

Peptide Sequence

PEP ID

XP_016478824.1
PEP Infomation

PREDICTED: protein-tyrosine-phosphatase MKP1-like [Nicotiana tabacum]
Sequence

MLGLDEKDRVPGGNRKTYARSVSWSDRSPTKSSAKPQWNSKARACLPPLQPLSITRPSAE
EWPCAGSDDLGVWPNNPPTPGGRLGPVSTREGSATKQAPREFEFKKDKLAFFNKECSKIV
DHIYLGSDTVAKNRDILHENGITHVLNCVGFSCPEYFKDDLVYKTLWLQDSPTEDITSIL
YDVFDYFEDVREQGGRVFVHCYQGVSRSTSLVIAYLMWKEGLSFEDAFQHVKAARGVTNP
NMGFACQLLQCQKRVHALXLPVSPSSVLRMYRMAPHSPYDPLHLVPKMLNEAGAEGFDSR
GAFLVLIPSAIYVWIGKHCDSVMSDNARAAAFQVIRYEKAQGPVIIINEGKEPSDFWSAL
SHGSFFTGGCSKEKTKVEASLLDGTTGTITDNIIQYIGQKKVGEYDLDFEIFYKALAGGV
VPPFPLSGTESEMRLPARENGWSRLRRKFSSGIMKEFITASKLYSHTGGQASPVLDKMDT
SKEISPALPSSPSSPQCDSPDSFSSYATSSPSFRDAGNSGLDSEPLLSPSPSFSSLDSLS
CFLVNKPKSDTTSPSLSPSTSDYSSSFTFSPSSSNWSDLAYLSAQPSPTRFEYEDPNFVK
NDSFKESSSLLCKETSLPAEEAFPTCRALRRANSCLQYKEAFPSLAERRGSHPPPRMMLR
CNDDSTQISAKLVRTSSFSLPSFGDDTMKCLECDNLNDGDFVDTSKEELMLDVESSTTDN
QLPNGVQPDDVSGSFYDHPIIVAETTDLGLYQWPCMHKLGLASGVFDSRSVYIIVIPDLS
LDENSSNSLYIWVGRDVQWNESPNQVINNESMCEDGHVHWEKVGRRFLIQKGLATSSLVQ
IVKEGEEPEQLLKHLPCFSLEKTY

Transcript Sequence

Gene sequence data has not been registered.